Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.17■□□□□ 0.5
Cacna1aP97445 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cacna1aP97445 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna1aP97445 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1aP97445 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1aP97445 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.16■□□□□ 0.5
Cacna1aP97445 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cacna1aP97445 Gm6211-202ENSMUST00000167849 925 ntBASIC18.16■□□□□ 0.5
Cacna1aP97445 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.16■□□□□ 0.5
Cacna1aP97445 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.16■□□□□ 0.5
Cacna1aP97445 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1aP97445 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cacna1aP97445 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Cacna1aP97445 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacna1aP97445 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacna1aP97445 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Cacna1aP97445 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1aP97445 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cacna1aP97445 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1aP97445 Gm7290-201ENSMUST00000104990 617 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Gm12918-201ENSMUST00000120234 636 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 Gm15710-201ENSMUST00000121821 636 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 Gm5075-201ENSMUST00000196916 622 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1aP97445 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1aP97445 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1aP97445 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.13■□□□□ 0.49
Cacna1aP97445 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.13■□□□□ 0.49
Cacna1aP97445 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacna1aP97445 Gm20049-201ENSMUST00000219950 730 ntBASIC18.12■□□□□ 0.49
Cacna1aP97445 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.12■□□□□ 0.49
Cacna1aP97445 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1aP97445 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cacna1aP97445 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cacna1aP97445 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1aP97445 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.11■□□□□ 0.49
Cacna1aP97445 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cacna1aP97445 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1aP97445 Gm37856-201ENSMUST00000191634 999 ntBASIC18.11■□□□□ 0.49
Cacna1aP97445 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cacna1aP97445 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1aP97445 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Cacna1aP97445 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1aP97445 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.11■□□□□ 0.49
Cacna1aP97445 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.1■□□□□ 0.49
Cacna1aP97445 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.1■□□□□ 0.49
Cacna1aP97445 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cacna1aP97445 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms