Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NrlP54846 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NrlP54846 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.94■□□□□ 0.94
NrlP54846 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NrlP54846 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NrlP54846 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NrlP54846 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NrlP54846 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NrlP54846 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NrlP54846 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
NrlP54846 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Gm13234-201ENSMUST00000120010 747 ntBASIC20.92■□□□□ 0.94
NrlP54846 Gm12933-201ENSMUST00000120203 872 ntBASIC20.92■□□□□ 0.94
NrlP54846 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.92■□□□□ 0.94
NrlP54846 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NrlP54846 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NrlP54846 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NrlP54846 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.91■□□□□ 0.94
NrlP54846 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NrlP54846 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.91■□□□□ 0.94
NrlP54846 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NrlP54846 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NrlP54846 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NrlP54846 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NrlP54846 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.9■□□□□ 0.94
NrlP54846 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.9■□□□□ 0.94
NrlP54846 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NrlP54846 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NrlP54846 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.89■□□□□ 0.94
NrlP54846 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NrlP54846 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NrlP54846 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.89■□□□□ 0.93
NrlP54846 Gm27801-201ENSMUST00000184174 223 ntBASIC20.89■□□□□ 0.93
NrlP54846 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.89■□□□□ 0.93
NrlP54846 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.89■□□□□ 0.93
NrlP54846 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NrlP54846 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NrlP54846 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.88■□□□□ 0.93
NrlP54846 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
NrlP54846 Reep4-203ENSMUST00000226563 1444 ntBASIC20.87■□□□□ 0.93
NrlP54846 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NrlP54846 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NrlP54846 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.87■□□□□ 0.93
NrlP54846 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NrlP54846 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NrlP54846 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NrlP54846 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NrlP54846 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NrlP54846 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.86■□□□□ 0.93
NrlP54846 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NrlP54846 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.86■□□□□ 0.93
NrlP54846 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NrlP54846 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NrlP54846 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.85■□□□□ 0.93
NrlP54846 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.85■□□□□ 0.93
NrlP54846 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.85■□□□□ 0.93
NrlP54846 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NrlP54846 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms