Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf1aP25118 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf1aP25118 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tnfrsf1aP25118 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf1aP25118 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf1aP25118 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf1aP25118 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf1aP25118 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf1aP25118 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms