Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P03980 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.14■□□□□ 0.01
P03980 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.14■□□□□ 0.01
P03980 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
P03980 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
P03980 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P03980 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.13■□□□□ 0.01
P03980 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.13■□□□□ 0.01
P03980 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.13■□□□□ 0.01
P03980 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.13■□□□□ 0.01
P03980 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P03980 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P03980 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.12■□□□□ 0.01
P03980 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.12■□□□□ 0.01
P03980 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
P03980 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P03980 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P03980 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P03980 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.11■□□□□ 0.01
P03980 Mir6236-201ENSMUST00000184437 123 ntBASIC15.11■□□□□ 0.01
P03980 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.11■□□□□ 0.01
P03980 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.11■□□□□ 0.01
P03980 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P03980 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P03980 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P03980 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P03980 Gm43566-201ENSMUST00000196851 808 ntBASIC15.1■□□□□ 0.01
P03980 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P03980 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
P03980 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P03980 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P03980 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
P03980 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P03980 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.09■□□□□ 0.01
P03980 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.09■□□□□ 0.01
P03980 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P03980 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
P03980 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.08■□□□□ 0
P03980 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.08■□□□□ 0
P03980 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.08■□□□□ 0
P03980 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.08■□□□□ 0
P03980 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
P03980 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.08■□□□□ 0
P03980 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.08■□□□□ 0
P03980 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P03980 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
P03980 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 176.4 ms