Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa8J3QNX5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa8J3QNX5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.87■□□□□ 0.45
Shisa8J3QNX5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa8J3QNX5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa8J3QNX5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa8J3QNX5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa8J3QNX5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Shisa8J3QNX5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa8J3QNX5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shisa8J3QNX5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Shisa8J3QNX5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.83■□□□□ 0.45
Shisa8J3QNX5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa8J3QNX5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shisa8J3QNX5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Shisa8J3QNX5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.83■□□□□ 0.44
Shisa8J3QNX5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Gm10399-202ENSMUST00000202768 748 ntBASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.82■□□□□ 0.44
Shisa8J3QNX5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shisa8J3QNX5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Gm7143-201ENSMUST00000222811 859 ntBASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shisa8J3QNX5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms