Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.91■□□□□ 0.62
Colca2F8VPY8 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.91■□□□□ 0.62
Colca2F8VPY8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.91■□□□□ 0.62
Colca2F8VPY8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Colca2F8VPY8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.9■□□□□ 0.62
Colca2F8VPY8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Colca2F8VPY8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.89■□□□□ 0.61
Colca2F8VPY8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Colca2F8VPY8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Gm26524-201ENSMUST00000192339 390 ntBASIC18.88■□□□□ 0.61
Colca2F8VPY8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Colca2F8VPY8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Colca2F8VPY8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Colca2F8VPY8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Colca2F8VPY8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Colca2F8VPY8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Colca2F8VPY8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.86■□□□□ 0.61
Colca2F8VPY8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.86■□□□□ 0.61
Colca2F8VPY8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Colca2F8VPY8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.85■□□□□ 0.61
Colca2F8VPY8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colca2F8VPY8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Mir6982-201ENSMUST00000184354 68 ntBASIC18.84■□□□□ 0.61
Colca2F8VPY8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Colca2F8VPY8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Colca2F8VPY8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Colca2F8VPY8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colca2F8VPY8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.82■□□□□ 0.6
Colca2F8VPY8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.82■□□□□ 0.6
Colca2F8VPY8 Rab3c-203ENSMUST00000224180 967 ntBASIC18.82■□□□□ 0.6
Colca2F8VPY8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Colca2F8VPY8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Colca2F8VPY8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colca2F8VPY8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colca2F8VPY8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms