Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh11xF6ZNL5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh11xF6ZNL5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh11xF6ZNL5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh11xF6ZNL5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh11xF6ZNL5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh11xF6ZNL5 AA386476-201ENSMUST00000098781 1665 ntBASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh11xF6ZNL5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh11xF6ZNL5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh11xF6ZNL5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh11xF6ZNL5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.72■■□□□ 1.07
Pcdh11xF6ZNL5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh11xF6ZNL5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdh11xF6ZNL5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh11xF6ZNL5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh11xF6ZNL5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Serp2-204ENSMUST00000228055 705 ntBASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdh11xF6ZNL5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh11xF6ZNL5 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh11xF6ZNL5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdh11xF6ZNL5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms