Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.33□□□□□ -0.6
Herc1E9PZP8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Herc1E9PZP8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.33□□□□□ -0.6
Herc1E9PZP8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC11.32□□□□□ -0.6
Herc1E9PZP8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Herc1E9PZP8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.31□□□□□ -0.6
Herc1E9PZP8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Gm7889-201ENSMUST00000185591 958 ntBASIC11.31□□□□□ -0.6
Herc1E9PZP8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Gm43438-201ENSMUST00000198133 379 ntBASIC11.31□□□□□ -0.6
Herc1E9PZP8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Herc1E9PZP8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Gm10013-201ENSMUST00000106074 672 ntBASIC11.3□□□□□ -0.6
Herc1E9PZP8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Herc1E9PZP8 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.3□□□□□ -0.6
Herc1E9PZP8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.29□□□□□ -0.6
Herc1E9PZP8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc1E9PZP8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Gm14859-201ENSMUST00000117752 357 ntBASIC11.28□□□□□ -0.6
Herc1E9PZP8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 AA414768-201ENSMUST00000121924 1257 ntBASIC11.28□□□□□ -0.6
Herc1E9PZP8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc1E9PZP8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms