Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh2d4bA6X942 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh2d4bA6X942 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Gm12933-201ENSMUST00000120203 872 ntBASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sh2d4bA6X942 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sh2d4bA6X942 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh2d4bA6X942 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh2d4bA6X942 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh2d4bA6X942 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh2d4bA6X942 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh2d4bA6X942 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.86■□□□□ 0.93
Sh2d4bA6X942 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.86■□□□□ 0.93
Sh2d4bA6X942 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh2d4bA6X942 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh2d4bA6X942 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh2d4bA6X942 Gm11421-201ENSMUST00000122124 294 ntBASIC20.85■□□□□ 0.93
Sh2d4bA6X942 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sh2d4bA6X942 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms