Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Mir7075-201ENSMUST00000184187 82 ntBASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-5A0A0G2JFX6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-5A0A0G2JFX6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Spcs1-204ENSMUST00000226782 949 ntBASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-5A0A0G2JFX6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav7-5A0A0G2JFX6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7-5A0A0G2JFX6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Gm45417-201ENSMUST00000209533 758 ntBASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-5A0A0G2JFX6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-5A0A0G2JFX6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Trav7-5A0A0G2JFX6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trav7-5A0A0G2JFX6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-5A0A0G2JFX6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7-5A0A0G2JFX6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms