Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv5-45A0A0B4J1J1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.2■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms