Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gm7417-201ENSMUST00000192950 473 ntBASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gm15546-201ENSMUST00000122095 826 ntBASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.96□□□□□ -0.17
Ighv1-49A0A0A6YWX2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Etf1-202ENSMUST00000180351 108 ntBASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Gm5812-201ENSMUST00000061073 957 ntBASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-49A0A0A6YWX2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms