Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Necab3Q9D6J4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Necab3Q9D6J4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Necab3Q9D6J4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Necab3Q9D6J4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Necab3Q9D6J4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Necab3Q9D6J4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Necab3Q9D6J4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Necab3Q9D6J4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Necab3Q9D6J4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Necab3Q9D6J4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Necab3Q9D6J4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Necab3Q9D6J4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Necab3Q9D6J4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Necab3Q9D6J4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Necab3Q9D6J4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Necab3Q9D6J4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Necab3Q9D6J4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Necab3Q9D6J4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20■□□□□ 0.79
Necab3Q9D6J4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Necab3Q9D6J4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20■□□□□ 0.79
Necab3Q9D6J4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Necab3Q9D6J4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Necab3Q9D6J4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms