Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Gm10033-202ENSMUST00000211874 928 ntBASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf138Q9CQE0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf138Q9CQE0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf138Q9CQE0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf138Q9CQE0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.58■□□□□ 0.56
Rnf138Q9CQE0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf138Q9CQE0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf138Q9CQE0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf138Q9CQE0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf138Q9CQE0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf138Q9CQE0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rnf138Q9CQE0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms