Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpgs1Q99MS8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpgs1Q99MS8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Serp2-204ENSMUST00000228055 705 ntBASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Tpgs1Q99MS8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpgs1Q99MS8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpgs1Q99MS8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tpgs1Q99MS8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tpgs1Q99MS8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpgs1Q99MS8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tpgs1Q99MS8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpgs1Q99MS8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tpgs1Q99MS8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.58■□□□□ 0.89
Tpgs1Q99MS8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.58■□□□□ 0.89
Tpgs1Q99MS8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.58■□□□□ 0.89
Tpgs1Q99MS8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tpgs1Q99MS8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.58■□□□□ 0.88
Tpgs1Q99MS8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tpgs1Q99MS8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Tpgs1Q99MS8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tpgs1Q99MS8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms