Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scrt1Q99M85 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scrt1Q99M85 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scrt1Q99M85 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scrt1Q99M85 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.26■□□□□ 0.35
Scrt1Q99M85 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scrt1Q99M85 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scrt1Q99M85 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scrt1Q99M85 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scrt1Q99M85 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.24■□□□□ 0.35
Scrt1Q99M85 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scrt1Q99M85 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scrt1Q99M85 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scrt1Q99M85 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.24■□□□□ 0.35
Scrt1Q99M85 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Scrt1Q99M85 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scrt1Q99M85 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scrt1Q99M85 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scrt1Q99M85 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scrt1Q99M85 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scrt1Q99M85 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scrt1Q99M85 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Golph3-202ENSMUST00000226517 2359 ntBASIC17.2■□□□□ 0.34
Scrt1Q99M85 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scrt1Q99M85 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.19■□□□□ 0.34
Scrt1Q99M85 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.19■□□□□ 0.34
Scrt1Q99M85 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Scrt1Q99M85 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Scrt1Q99M85 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scrt1Q99M85 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scrt1Q99M85 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.18■□□□□ 0.34
Scrt1Q99M85 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scrt1Q99M85 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms