Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfc3Q8R323 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfc3Q8R323 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rfc3Q8R323 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.14■□□□□ 0.49
Rfc3Q8R323 Spcs1-204ENSMUST00000226782 949 ntBASIC18.14■□□□□ 0.49
Rfc3Q8R323 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc3Q8R323 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfc3Q8R323 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfc3Q8R323 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.12■□□□□ 0.49
Rfc3Q8R323 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfc3Q8R323 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfc3Q8R323 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfc3Q8R323 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfc3Q8R323 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfc3Q8R323 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfc3Q8R323 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfc3Q8R323 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfc3Q8R323 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Gm18284-201ENSMUST00000172604 624 ntBASIC18.09■□□□□ 0.49
Rfc3Q8R323 Gm40848-201ENSMUST00000221998 324 ntBASIC18.09■□□□□ 0.49
Rfc3Q8R323 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.09■□□□□ 0.49
Rfc3Q8R323 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc3Q8R323 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc3Q8R323 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc3Q8R323 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc3Q8R323 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc3Q8R323 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc3Q8R323 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.08■□□□□ 0.48
Rfc3Q8R323 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rfc3Q8R323 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Gm26833-201ENSMUST00000180899 440 ntBASIC18.07■□□□□ 0.48
Rfc3Q8R323 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.07■□□□□ 0.48
Rfc3Q8R323 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Rfc3Q8R323 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Gm8495-201ENSMUST00000188740 694 ntBASIC18.06■□□□□ 0.48
Rfc3Q8R323 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc3Q8R323 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms