Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mmp28Q8CGV8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.79■□□□□ 0.28
Mmp28Q8CGV8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp28Q8CGV8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp28Q8CGV8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp28Q8CGV8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp28Q8CGV8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
Mmp28Q8CGV8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp28Q8CGV8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mmp28Q8CGV8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mmp28Q8CGV8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms