Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrsam1Q80ZI6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrsam1Q80ZI6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrsam1Q80ZI6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Lrsam1Q80ZI6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.28■■□□□ 1
Lrsam1Q80ZI6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.27■■□□□ 1
Lrsam1Q80ZI6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrsam1Q80ZI6 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.27■□□□□ 0.99
Lrsam1Q80ZI6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Gm10399-202ENSMUST00000202768 748 ntBASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrsam1Q80ZI6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Gm12922-201ENSMUST00000120626 809 ntBASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Lrsam1Q80ZI6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrsam1Q80ZI6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Lrsam1Q80ZI6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrsam1Q80ZI6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrsam1Q80ZI6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrsam1Q80ZI6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrsam1Q80ZI6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lrsam1Q80ZI6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms