Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 Gm43017-201ENSMUST00000198296 752 ntBASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.38■■□□□ 1.01
R3hdm4Q4VBF2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
R3hdm4Q4VBF2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3hdm4Q4VBF2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.35■■□□□ 1.01
R3hdm4Q4VBF2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3hdm4Q4VBF2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
R3hdm4Q4VBF2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
R3hdm4Q4VBF2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
R3hdm4Q4VBF2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.33■■□□□ 1
R3hdm4Q4VBF2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
R3hdm4Q4VBF2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.33■■□□□ 1
R3hdm4Q4VBF2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3hdm4Q4VBF2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3hdm4Q4VBF2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
R3hdm4Q4VBF2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Smad6-203ENSMUST00000179458 273 ntBASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Serp2-204ENSMUST00000228055 705 ntBASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.29■■□□□ 1
R3hdm4Q4VBF2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms