Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brf2Q3UAW9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brf2Q3UAW9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brf2Q3UAW9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Brf2Q3UAW9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.53■□□□□ 0.56
Brf2Q3UAW9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brf2Q3UAW9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Brf2Q3UAW9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brf2Q3UAW9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Brf2Q3UAW9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brf2Q3UAW9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brf2Q3UAW9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brf2Q3UAW9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Brf2Q3UAW9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.49■□□□□ 0.55
Brf2Q3UAW9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brf2Q3UAW9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brf2Q3UAW9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms