Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Serp2-204ENSMUST00000228055 705 ntBASIC18.6■□□□□ 0.57
Mmp25Q3U435 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp25Q3U435 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Smad6-203ENSMUST00000179458 273 ntBASIC18.59■□□□□ 0.57
Mmp25Q3U435 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp25Q3U435 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp25Q3U435 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp25Q3U435 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp25Q3U435 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Mmp25Q3U435 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.58■□□□□ 0.56
Mmp25Q3U435 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp25Q3U435 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Gm26833-201ENSMUST00000180899 440 ntBASIC18.57■□□□□ 0.56
Mmp25Q3U435 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.57■□□□□ 0.56
Mmp25Q3U435 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.57■□□□□ 0.56
Mmp25Q3U435 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Mmp25Q3U435 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp25Q3U435 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp25Q3U435 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
Mmp25Q3U435 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp25Q3U435 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mmp25Q3U435 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.55■□□□□ 0.56
Mmp25Q3U435 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mmp25Q3U435 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.55■□□□□ 0.56
Mmp25Q3U435 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.54■□□□□ 0.56
Mmp25Q3U435 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mmp25Q3U435 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.53■□□□□ 0.56
Mmp25Q3U435 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Mmp25Q3U435 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Gm11421-201ENSMUST00000122124 294 ntBASIC18.52■□□□□ 0.56
Mmp25Q3U435 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.52■□□□□ 0.56
Mmp25Q3U435 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Mmp25Q3U435 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms