Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cacna1aP97445 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1aP97445 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cacna1aP97445 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cacna1aP97445 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.26■□□□□ 0.51
Cacna1aP97445 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cacna1aP97445 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.26■□□□□ 0.51
Cacna1aP97445 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cacna1aP97445 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Mir5133-201ENSMUST00000174955 77 ntBASIC18.26■□□□□ 0.51
Cacna1aP97445 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.26■□□□□ 0.51
Cacna1aP97445 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1aP97445 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.25■□□□□ 0.51
Cacna1aP97445 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cacna1aP97445 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1aP97445 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1aP97445 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.24■□□□□ 0.51
Cacna1aP97445 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1aP97445 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.23■□□□□ 0.51
Cacna1aP97445 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.23■□□□□ 0.51
Cacna1aP97445 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.23■□□□□ 0.51
Cacna1aP97445 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1aP97445 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.22■□□□□ 0.51
Cacna1aP97445 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.22■□□□□ 0.51
Cacna1aP97445 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Gm13168-201ENSMUST00000121771 632 ntBASIC18.22■□□□□ 0.51
Cacna1aP97445 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.22■□□□□ 0.51
Cacna1aP97445 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.22■□□□□ 0.51
Cacna1aP97445 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.22■□□□□ 0.51
Cacna1aP97445 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1aP97445 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.21■□□□□ 0.51
Cacna1aP97445 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1aP97445 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cacna1aP97445 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cacna1aP97445 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Cacna1aP97445 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna1aP97445 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cacna1aP97445 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1aP97445 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Gm10812-201ENSMUST00000099864 546 ntBASIC18.19■□□□□ 0.5
Cacna1aP97445 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1aP97445 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.18■□□□□ 0.5
Cacna1aP97445 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cacna1aP97445 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 Gm13146-201ENSMUST00000118508 780 ntBASIC18.18■□□□□ 0.5
Cacna1aP97445 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cacna1aP97445 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cacna1aP97445 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1aP97445 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms