Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Rps24-207ENSMUST00000224568 714 ntBASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfrsf1aP25118 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Gm22238-201ENSMUST00000175222 88 ntBASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf1aP25118 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf1aP25118 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf1aP25118 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf1aP25118 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf1aP25118 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Gm14117-201ENSMUST00000122417 843 ntBASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Gm45102-201ENSMUST00000207427 857 ntBASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf1aP25118 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf1aP25118 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms