Protein–RNA interactions for Protein: P18826

Phka1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, mousemouse

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phka1P18826 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phka1P18826 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phka1P18826 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phka1P18826 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Phka1P18826 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.91■■□□□ 1.1
Phka1P18826 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Phka1P18826 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Phka1P18826 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Phka1P18826 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Phka1P18826 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Phka1P18826 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Phka1P18826 Gm27801-201ENSMUST00000184174 223 ntBASIC21.89■■□□□ 1.09
Phka1P18826 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.89■■□□□ 1.09
Phka1P18826 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Phka1P18826 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Phka1P18826 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.88■■□□□ 1.09
Phka1P18826 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.88■■□□□ 1.09
Phka1P18826 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Phka1P18826 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.87■■□□□ 1.09
Phka1P18826 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Phka1P18826 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Phka1P18826 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Phka1P18826 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.86■■□□□ 1.09
Phka1P18826 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.86■■□□□ 1.09
Phka1P18826 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Phka1P18826 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Phka1P18826 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.85■■□□□ 1.09
Phka1P18826 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Phka1P18826 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Phka1P18826 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.84■■□□□ 1.09
Phka1P18826 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Phka1P18826 Gm12933-201ENSMUST00000120203 872 ntBASIC21.84■■□□□ 1.09
Phka1P18826 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.84■■□□□ 1.09
Phka1P18826 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Phka1P18826 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Phka1P18826 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Phka1P18826 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Phka1P18826 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.83■■□□□ 1.09
Phka1P18826 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Phka1P18826 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Phka1P18826 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Phka1P18826 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Phka1P18826 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.82■■□□□ 1.08
Phka1P18826 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Phka1P18826 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Phka1P18826 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Phka1P18826 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Phka1P18826 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Phka1P18826 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Phka1P18826 Gm7514-201ENSMUST00000209475 934 ntBASIC21.81■■□□□ 1.08
Phka1P18826 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Phka1P18826 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Phka1P18826 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Phka1P18826 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Phka1P18826 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Phka1P18826 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms