Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan6O70401 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan6O70401 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.31■□□□□ 0.68
Tspan6O70401 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan6O70401 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan6O70401 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Tspan6O70401 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tspan6O70401 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.3■□□□□ 0.68
Tspan6O70401 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tspan6O70401 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.3■□□□□ 0.68
Tspan6O70401 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.3■□□□□ 0.68
Tspan6O70401 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tspan6O70401 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan6O70401 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Tspan6O70401 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Gm13234-201ENSMUST00000120010 747 ntBASIC19.29■□□□□ 0.68
Tspan6O70401 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Tspan6O70401 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan6O70401 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.28■□□□□ 0.68
Tspan6O70401 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan6O70401 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.27■□□□□ 0.68
Tspan6O70401 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan6O70401 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.27■□□□□ 0.68
Tspan6O70401 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tspan6O70401 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tspan6O70401 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tspan6O70401 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.27■□□□□ 0.67
Tspan6O70401 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Tspan6O70401 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan6O70401 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.26■□□□□ 0.67
Tspan6O70401 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan6O70401 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan6O70401 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan6O70401 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.26■□□□□ 0.67
Tspan6O70401 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.26■□□□□ 0.67
Tspan6O70401 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
Tspan6O70401 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tspan6O70401 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tspan6O70401 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tspan6O70401 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.25■□□□□ 0.67
Tspan6O70401 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.25■□□□□ 0.67
Tspan6O70401 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tspan6O70401 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Tspan6O70401 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.25■□□□□ 0.67
Tspan6O70401 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tspan6O70401 Reep4-203ENSMUST00000226563 1444 ntBASIC19.25■□□□□ 0.67
Tspan6O70401 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.24■□□□□ 0.67
Tspan6O70401 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tspan6O70401 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.24■□□□□ 0.67
Tspan6O70401 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.24■□□□□ 0.67
Tspan6O70401 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tspan6O70401 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan6O70401 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tspan6O70401 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan6O70401 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan6O70401 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan6O70401 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan6O70401 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan6O70401 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms