Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 AC153881.1-201ENSMUST00000214448 284 ntBASIC9.79□□□□□ -0.84
Rnf213E9Q555 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Rnf213E9Q555 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rnf213E9Q555 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Gm6576-201ENSMUST00000169678 883 ntBASIC9.78□□□□□ -0.84
Rnf213E9Q555 Gm43799-201ENSMUST00000201845 579 ntBASIC9.78□□□□□ -0.84
Rnf213E9Q555 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Gm18101-201ENSMUST00000215769 548 ntBASIC9.78□□□□□ -0.84
Rnf213E9Q555 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rnf213E9Q555 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rnf213E9Q555 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rnf213E9Q555 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Rnf213E9Q555 Gm5643-201ENSMUST00000117081 966 ntBASIC9.76□□□□□ -0.85
Rnf213E9Q555 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Gm27741-201ENSMUST00000185060 237 ntBASIC9.76□□□□□ -0.85
Rnf213E9Q555 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rnf213E9Q555 Gm44672-201ENSMUST00000206944 1098 ntBASIC9.75□□□□□ -0.85
Rnf213E9Q555 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Rnf213E9Q555 AC153890.1-201ENSMUST00000220021 2469 ntBASIC9.75□□□□□ -0.85
Rnf213E9Q555 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.75□□□□□ -0.85
Rnf213E9Q555 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Gm37055-201ENSMUST00000191866 133 ntBASIC9.74□□□□□ -0.85
Rnf213E9Q555 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC9.74□□□□□ -0.85
Rnf213E9Q555 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 CT010444.2-201ENSMUST00000217877 1629 ntBASIC9.74□□□□□ -0.85
Rnf213E9Q555 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rnf213E9Q555 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms