Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh2d4bA6X942 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh2d4bA6X942 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sh2d4bA6X942 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh2d4bA6X942 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Gm42778-201ENSMUST00000199644 553 ntBASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh2d4bA6X942 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sh2d4bA6X942 Gm12669-201ENSMUST00000122162 1009 ntBASIC21■□□□□ 0.95
Sh2d4bA6X942 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 Gm10602-201ENSMUST00000098239 609 ntBASIC21■□□□□ 0.95
Sh2d4bA6X942 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sh2d4bA6X942 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh2d4bA6X942 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh2d4bA6X942 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sh2d4bA6X942 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Sh2d4bA6X942 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh2d4bA6X942 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh2d4bA6X942 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms