Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv3-9A0A140T8P4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv3-9A0A140T8P4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Gm9870-201ENSMUST00000063874 645 ntBASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Gm20634-201ENSMUST00000090779 2956 ntBASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv3-9A0A140T8P4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Igkv3-9A0A140T8P4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv3-9A0A140T8P4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-9A0A140T8P4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Igkv3-9A0A140T8P4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-9A0A140T8P4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv3-9A0A140T8P4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Mir6236-201ENSMUST00000184437 123 ntBASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv3-9A0A140T8P4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv3-9A0A140T8P4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms