Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ighv1-23A0A0A6YVW3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.63□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm7143-201ENSMUST00000222811 859 ntBASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ighv1-23A0A0A6YVW3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Mir6236-201ENSMUST00000184437 123 ntBASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ighv1-23A0A0A6YVW3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms