Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6d-3A0A075B6B3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-3A0A075B6B3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6d-3A0A075B6B3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6d-3A0A075B6B3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Gm5812-201ENSMUST00000061073 957 ntBASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6d-3A0A075B6B3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6d-3A0A075B6B3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6d-3A0A075B6B3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav6d-3A0A075B6B3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Gm15546-201ENSMUST00000122095 826 ntBASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-3A0A075B6B3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-3A0A075B6B3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms