Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6n-5A0A075B621 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-5A0A075B621 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-5A0A075B621 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6n-5A0A075B621 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Gm11687-201ENSMUST00000118911 886 ntBASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6n-5A0A075B621 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6n-5A0A075B621 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6n-5A0A075B621 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6n-5A0A075B621 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav6n-5A0A075B621 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.21■□□□□ 0.03
Trav6n-5A0A075B621 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms