Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msantd3Q9CR78 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msantd3Q9CR78 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msantd3Q9CR78 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msantd3Q9CR78 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Msantd3Q9CR78 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Msantd3Q9CR78 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msantd3Q9CR78 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Msantd3Q9CR78 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Msantd3Q9CR78 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
Msantd3Q9CR78 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Msantd3Q9CR78 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msantd3Q9CR78 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Msantd3Q9CR78 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.98■□□□□ 0.63
Msantd3Q9CR78 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.98■□□□□ 0.63
Msantd3Q9CR78 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Msantd3Q9CR78 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msantd3Q9CR78 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms