Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim11Q99PQ2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trim11Q99PQ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim11Q99PQ2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim11Q99PQ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim11Q99PQ2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim11Q99PQ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trim11Q99PQ2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim11Q99PQ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim11Q99PQ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim11Q99PQ2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.56■■□□□ 1.2
Trim11Q99PQ2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim11Q99PQ2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim11Q99PQ2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim11Q99PQ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.54■■□□□ 1.2
Trim11Q99PQ2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Trim11Q99PQ2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim11Q99PQ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim11Q99PQ2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim11Q99PQ2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.52■■□□□ 1.19
Trim11Q99PQ2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim11Q99PQ2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim11Q99PQ2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim11Q99PQ2 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.5■■□□□ 1.19
Trim11Q99PQ2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Trim11Q99PQ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim11Q99PQ2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim11Q99PQ2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.47■■□□□ 1.19
Trim11Q99PQ2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim11Q99PQ2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms