Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nck1Q99M51 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nck1Q99M51 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nck1Q99M51 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nck1Q99M51 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nck1Q99M51 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nck1Q99M51 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nck1Q99M51 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nck1Q99M51 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nck1Q99M51 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Nck1Q99M51 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.86■□□□□ 0.61
Nck1Q99M51 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nck1Q99M51 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.85■□□□□ 0.61
Nck1Q99M51 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.85■□□□□ 0.61
Nck1Q99M51 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.85■□□□□ 0.61
Nck1Q99M51 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Nck1Q99M51 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nck1Q99M51 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.84■□□□□ 0.61
Nck1Q99M51 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.84■□□□□ 0.61
Nck1Q99M51 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nck1Q99M51 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.84■□□□□ 0.61
Nck1Q99M51 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.84■□□□□ 0.61
Nck1Q99M51 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nck1Q99M51 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nck1Q99M51 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nck1Q99M51 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.61
Nck1Q99M51 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.83■□□□□ 0.61
Nck1Q99M51 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nck1Q99M51 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nck1Q99M51 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.83■□□□□ 0.61
Nck1Q99M51 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nck1Q99M51 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nck1Q99M51 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nck1Q99M51 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.83■□□□□ 0.6
Nck1Q99M51 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Nck1Q99M51 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nck1Q99M51 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nck1Q99M51 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nck1Q99M51 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Mir6538-201ENSMUST00000183713 110 ntBASIC18.81■□□□□ 0.6
Nck1Q99M51 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nck1Q99M51 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nck1Q99M51 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nck1Q99M51 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nck1Q99M51 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nck1Q99M51 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nck1Q99M51 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nck1Q99M51 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nck1Q99M51 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.79■□□□□ 0.6
Nck1Q99M51 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nck1Q99M51 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms