Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Col20a1Q923P0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Col20a1Q923P0 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.52■■□□□ 1.36
Col20a1Q923P0 Gm42642-201ENSMUST00000200683 355 ntBASIC23.52■■□□□ 1.36
Col20a1Q923P0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col20a1Q923P0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Col20a1Q923P0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Col20a1Q923P0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col20a1Q923P0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col20a1Q923P0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.51■■□□□ 1.35
Col20a1Q923P0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col20a1Q923P0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Col20a1Q923P0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Col20a1Q923P0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.51■■□□□ 1.35
Col20a1Q923P0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Col20a1Q923P0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Gm26571-201ENSMUST00000181399 666 ntBASIC23.49■■□□□ 1.35
Col20a1Q923P0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Col20a1Q923P0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Gm10849-201ENSMUST00000100397 618 ntBASIC23.48■■□□□ 1.35
Col20a1Q923P0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Gm27801-201ENSMUST00000184174 223 ntBASIC23.48■■□□□ 1.35
Col20a1Q923P0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Col20a1Q923P0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col20a1Q923P0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Col20a1Q923P0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col20a1Q923P0 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.47■■□□□ 1.35
Col20a1Q923P0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col20a1Q923P0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Col20a1Q923P0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.47■■□□□ 1.35
Col20a1Q923P0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Col20a1Q923P0 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.46■■□□□ 1.35
Col20a1Q923P0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Gm42569-201ENSMUST00000200539 472 ntBASIC23.45■■□□□ 1.34
Col20a1Q923P0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Col20a1Q923P0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Col20a1Q923P0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Gm7291-201ENSMUST00000199147 382 ntBASIC23.43■■□□□ 1.34
Col20a1Q923P0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Gm10033-202ENSMUST00000211874 928 ntBASIC23.43■■□□□ 1.34
Col20a1Q923P0 Gm18671-201ENSMUST00000214826 683 ntBASIC23.43■■□□□ 1.34
Col20a1Q923P0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Col20a1Q923P0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Col20a1Q923P0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.42■■□□□ 1.34
Col20a1Q923P0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col20a1Q923P0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col20a1Q923P0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Col20a1Q923P0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Gm27405-201ENSMUST00000184201 112 ntBASIC23.41■■□□□ 1.34
Col20a1Q923P0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.41■■□□□ 1.34
Col20a1Q923P0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 150 ms