Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.66■■□□□ 1.22
Ddx41Q91VN6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Ddx41Q91VN6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx41Q91VN6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx41Q91VN6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx41Q91VN6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.65■■□□□ 1.22
Ddx41Q91VN6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Spcs1-204ENSMUST00000226782 949 ntBASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx41Q91VN6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx41Q91VN6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx41Q91VN6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.61■■□□□ 1.21
Ddx41Q91VN6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.61■■□□□ 1.21
Ddx41Q91VN6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx41Q91VN6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx41Q91VN6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Ddx41Q91VN6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.6■■□□□ 1.21
Ddx41Q91VN6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.6■■□□□ 1.21
Ddx41Q91VN6 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.6■■□□□ 1.21
Ddx41Q91VN6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx41Q91VN6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.58■■□□□ 1.21
Ddx41Q91VN6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ddx41Q91VN6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Ddx41Q91VN6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx41Q91VN6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx41Q91VN6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms