Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trnt1Q8K1J6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.2■□□□□ 0.66
Trnt1Q8K1J6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trnt1Q8K1J6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trnt1Q8K1J6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnt1Q8K1J6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.17■□□□□ 0.66
Trnt1Q8K1J6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnt1Q8K1J6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnt1Q8K1J6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trnt1Q8K1J6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Gm9847-201ENSMUST00000052528 599 ntBASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.16■□□□□ 0.66
Trnt1Q8K1J6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.15■□□□□ 0.66
Trnt1Q8K1J6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trnt1Q8K1J6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trnt1Q8K1J6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trnt1Q8K1J6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trnt1Q8K1J6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trnt1Q8K1J6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms