Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Gm12922-201ENSMUST00000120626 809 ntBASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3rf3Q8C120 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3rf3Q8C120 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3rf3Q8C120 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3rf3Q8C120 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3rf3Q8C120 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Mir6236-201ENSMUST00000184437 123 ntBASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.64■□□□□ 0.89
Sh3rf3Q8C120 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3rf3Q8C120 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Gm9847-201ENSMUST00000052528 599 ntBASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3rf3Q8C120 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3rf3Q8C120 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3rf3Q8C120 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Gm21956-201ENSMUST00000179946 522 ntBASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3rf3Q8C120 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Sh3rf3Q8C120 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3rf3Q8C120 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3rf3Q8C120 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3rf3Q8C120 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3rf3Q8C120 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3rf3Q8C120 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Sh3rf3Q8C120 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3rf3Q8C120 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3rf3Q8C120 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sh3rf3Q8C120 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3rf3Q8C120 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms