Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trpa1Q8BLA8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Gm12821-201ENSMUST00000120022 600 ntBASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trpa1Q8BLA8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trpa1Q8BLA8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trpa1Q8BLA8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trpa1Q8BLA8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
Trpa1Q8BLA8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpa1Q8BLA8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpa1Q8BLA8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trpa1Q8BLA8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpa1Q8BLA8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trpa1Q8BLA8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpa1Q8BLA8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpa1Q8BLA8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpa1Q8BLA8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms