Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynbQ8BI41 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SynbQ8BI41 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SynbQ8BI41 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SynbQ8BI41 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.78■□□□□ 0.6
SynbQ8BI41 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SynbQ8BI41 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.78■□□□□ 0.6
SynbQ8BI41 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SynbQ8BI41 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SynbQ8BI41 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SynbQ8BI41 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynbQ8BI41 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.77■□□□□ 0.6
SynbQ8BI41 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.77■□□□□ 0.6
SynbQ8BI41 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.77■□□□□ 0.6
SynbQ8BI41 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.77■□□□□ 0.6
SynbQ8BI41 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.77■□□□□ 0.6
SynbQ8BI41 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynbQ8BI41 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SynbQ8BI41 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SynbQ8BI41 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SynbQ8BI41 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SynbQ8BI41 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.76■□□□□ 0.59
SynbQ8BI41 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.76■□□□□ 0.59
SynbQ8BI41 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.76■□□□□ 0.59
SynbQ8BI41 Gm27405-201ENSMUST00000184201 112 ntBASIC18.76■□□□□ 0.59
SynbQ8BI41 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SynbQ8BI41 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SynbQ8BI41 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SynbQ8BI41 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SynbQ8BI41 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SynbQ8BI41 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.75■□□□□ 0.59
SynbQ8BI41 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.75■□□□□ 0.59
SynbQ8BI41 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SynbQ8BI41 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.74■□□□□ 0.59
SynbQ8BI41 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.74■□□□□ 0.59
SynbQ8BI41 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SynbQ8BI41 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Gm42569-201ENSMUST00000200539 472 ntBASIC18.73■□□□□ 0.59
SynbQ8BI41 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.73■□□□□ 0.59
SynbQ8BI41 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SynbQ8BI41 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SynbQ8BI41 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SynbQ8BI41 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SynbQ8BI41 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
SynbQ8BI41 Gm10849-201ENSMUST00000100397 618 ntBASIC18.72■□□□□ 0.59
SynbQ8BI41 Gm26571-201ENSMUST00000181399 666 ntBASIC18.72■□□□□ 0.59
SynbQ8BI41 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.72■□□□□ 0.59
SynbQ8BI41 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.72■□□□□ 0.59
SynbQ8BI41 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.72■□□□□ 0.59
SynbQ8BI41 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SynbQ8BI41 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.72■□□□□ 0.59
SynbQ8BI41 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.72■□□□□ 0.59
SynbQ8BI41 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms