Protein–RNA interactions for Protein: Q80ZM7

Gtf2a2, Transcription initiation factor IIA subunit 2, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a2Q80ZM7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.3■■□□□ 1
Gtf2a2Q80ZM7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gtf2a2Q80ZM7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf2a2Q80ZM7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf2a2Q80ZM7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.27■■□□□ 1
Gtf2a2Q80ZM7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.27■■□□□ 1
Gtf2a2Q80ZM7 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.27■■□□□ 1
Gtf2a2Q80ZM7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Gtf2a2Q80ZM7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf2a2Q80ZM7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gtf2a2Q80ZM7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf2a2Q80ZM7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2a2Q80ZM7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2a2Q80ZM7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 Gm10653-202ENSMUST00000139570 835 ntBASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2a2Q80ZM7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Gm4968-201ENSMUST00000071458 858 ntBASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gtf2a2Q80ZM7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf2a2Q80ZM7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2a2Q80ZM7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2a2Q80ZM7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.2■□□□□ 0.98
Gtf2a2Q80ZM7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2a2Q80ZM7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2a2Q80ZM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2a2Q80ZM7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Gtf2a2Q80ZM7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms