Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Usp6nlQ80XC3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Usp6nlQ80XC3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Usp6nlQ80XC3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp6nlQ80XC3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Usp6nlQ80XC3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Usp6nlQ80XC3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Usp6nlQ80XC3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Usp6nlQ80XC3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Usp6nlQ80XC3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Usp6nlQ80XC3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Usp6nlQ80XC3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp6nlQ80XC3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Usp6nlQ80XC3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Usp6nlQ80XC3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Usp6nlQ80XC3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Usp6nlQ80XC3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Usp6nlQ80XC3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Usp6nlQ80XC3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp6nlQ80XC3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Usp6nlQ80XC3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Usp6nlQ80XC3 Gm7514-201ENSMUST00000209475 934 ntBASIC21.89■■□□□ 1.09
Usp6nlQ80XC3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Usp6nlQ80XC3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Usp6nlQ80XC3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp6nlQ80XC3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp6nlQ80XC3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Usp6nlQ80XC3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Usp6nlQ80XC3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Usp6nlQ80XC3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms