Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clns1aQ61189 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clns1aQ61189 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clns1aQ61189 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clns1aQ61189 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.89■□□□□ 0.29
Clns1aQ61189 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clns1aQ61189 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clns1aQ61189 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.88■□□□□ 0.29
Clns1aQ61189 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.88■□□□□ 0.29
Clns1aQ61189 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clns1aQ61189 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.88■□□□□ 0.29
Clns1aQ61189 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Clns1aQ61189 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clns1aQ61189 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clns1aQ61189 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clns1aQ61189 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Clns1aQ61189 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clns1aQ61189 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.87■□□□□ 0.29
Clns1aQ61189 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Clns1aQ61189 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clns1aQ61189 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Clns1aQ61189 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Clns1aQ61189 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.86■□□□□ 0.29
Clns1aQ61189 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clns1aQ61189 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clns1aQ61189 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Clns1aQ61189 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Clns1aQ61189 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clns1aQ61189 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clns1aQ61189 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clns1aQ61189 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.84■□□□□ 0.29
Clns1aQ61189 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.84■□□□□ 0.29
Clns1aQ61189 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
Clns1aQ61189 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clns1aQ61189 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Clns1aQ61189 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Clns1aQ61189 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms