Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shroom1Q5SX79 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shroom1Q5SX79 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Shroom1Q5SX79 Gm40848-201ENSMUST00000221998 324 ntBASIC21.09■□□□□ 0.97
Shroom1Q5SX79 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Shroom1Q5SX79 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shroom1Q5SX79 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Shroom1Q5SX79 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shroom1Q5SX79 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Shroom1Q5SX79 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Shroom1Q5SX79 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Shroom1Q5SX79 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Gm10849-201ENSMUST00000100397 618 ntBASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.06■□□□□ 0.96
Shroom1Q5SX79 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.06■□□□□ 0.96
Shroom1Q5SX79 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shroom1Q5SX79 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shroom1Q5SX79 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Gm7291-201ENSMUST00000199147 382 ntBASIC21.04■□□□□ 0.96
Shroom1Q5SX79 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shroom1Q5SX79 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shroom1Q5SX79 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Mir6236-201ENSMUST00000184437 123 ntBASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shroom1Q5SX79 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shroom1Q5SX79 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Shroom1Q5SX79 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms