Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mmp25Q3U435 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.68■□□□□ 0.58
Mmp25Q3U435 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mmp25Q3U435 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mmp25Q3U435 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mmp25Q3U435 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.65■□□□□ 0.58
Mmp25Q3U435 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mmp25Q3U435 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mmp25Q3U435 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp25Q3U435 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp25Q3U435 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp25Q3U435 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.64■□□□□ 0.57
Mmp25Q3U435 Gm43017-201ENSMUST00000198296 752 ntBASIC18.64■□□□□ 0.57
Mmp25Q3U435 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp25Q3U435 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mmp25Q3U435 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mmp25Q3U435 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Mmp25Q3U435 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mmp25Q3U435 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Gm15039-201ENSMUST00000118914 875 ntBASIC18.61■□□□□ 0.57
Mmp25Q3U435 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp25Q3U435 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms