Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim63Q38HM4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.44■□□□□ 0.22
Trim63Q38HM4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.44■□□□□ 0.22
Trim63Q38HM4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim63Q38HM4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Gm8109-201ENSMUST00000194076 746 ntBASIC16.43■□□□□ 0.22
Trim63Q38HM4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim63Q38HM4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim63Q38HM4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.42■□□□□ 0.22
Trim63Q38HM4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim63Q38HM4 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.42■□□□□ 0.22
Trim63Q38HM4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim63Q38HM4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.41■□□□□ 0.22
Trim63Q38HM4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.41■□□□□ 0.22
Trim63Q38HM4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim63Q38HM4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.4■□□□□ 0.22
Trim63Q38HM4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.4■□□□□ 0.22
Trim63Q38HM4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.4■□□□□ 0.22
Trim63Q38HM4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim63Q38HM4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim63Q38HM4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Gm16148-201ENSMUST00000119653 893 ntBASIC16.39■□□□□ 0.21
Trim63Q38HM4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim63Q38HM4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms