Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cacna1aP97445 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1aP97445 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cacna1aP97445 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1aP97445 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cacna1aP97445 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.35■□□□□ 0.53
Cacna1aP97445 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Cacna1aP97445 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cacna1aP97445 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1aP97445 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacna1aP97445 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cacna1aP97445 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacna1aP97445 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1aP97445 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1aP97445 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.33■□□□□ 0.53
Cacna1aP97445 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1aP97445 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1aP97445 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Cacna1aP97445 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1aP97445 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1aP97445 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1aP97445 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1aP97445 Gm8520-201ENSMUST00000186517 868 ntBASIC18.33■□□□□ 0.52
Cacna1aP97445 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1aP97445 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.32■□□□□ 0.52
Cacna1aP97445 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Gm13836-201ENSMUST00000121159 501 ntBASIC18.32■□□□□ 0.52
Cacna1aP97445 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1aP97445 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.32■□□□□ 0.52
Cacna1aP97445 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.31■□□□□ 0.52
Cacna1aP97445 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.31■□□□□ 0.52
Cacna1aP97445 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cacna1aP97445 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Cacna1aP97445 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cacna1aP97445 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cacna1aP97445 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1aP97445 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1aP97445 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cacna1aP97445 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1aP97445 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1aP97445 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cacna1aP97445 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cacna1aP97445 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.29■□□□□ 0.52
Cacna1aP97445 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cacna1aP97445 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.28■□□□□ 0.52
Cacna1aP97445 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.28■□□□□ 0.52
Cacna1aP97445 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cacna1aP97445 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.28■□□□□ 0.52
Cacna1aP97445 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1aP97445 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1aP97445 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1aP97445 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1aP97445 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cacna1aP97445 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.28■□□□□ 0.52
Cacna1aP97445 Gm7514-201ENSMUST00000209475 934 ntBASIC18.28■□□□□ 0.52
Cacna1aP97445 Gm9988-201ENSMUST00000069786 435 ntBASIC18.28■□□□□ 0.52
Cacna1aP97445 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1aP97445 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.27■□□□□ 0.52
Cacna1aP97445 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.27■□□□□ 0.52
Cacna1aP97445 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1aP97445 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1aP97445 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms