Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxd8P23463 Reep4-203ENSMUST00000226563 1444 ntBASIC20.72■□□□□ 0.91
Hoxd8P23463 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.72■□□□□ 0.91
Hoxd8P23463 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Hoxd8P23463 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxd8P23463 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.72■□□□□ 0.91
Hoxd8P23463 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.72■□□□□ 0.91
Hoxd8P23463 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hoxd8P23463 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxd8P23463 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxd8P23463 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxd8P23463 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxd8P23463 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxd8P23463 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxd8P23463 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.71■□□□□ 0.91
Hoxd8P23463 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxd8P23463 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxd8P23463 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxd8P23463 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxd8P23463 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.7■□□□□ 0.9
Hoxd8P23463 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.7■□□□□ 0.9
Hoxd8P23463 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxd8P23463 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxd8P23463 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxd8P23463 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.69■□□□□ 0.9
Hoxd8P23463 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hoxd8P23463 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxd8P23463 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hoxd8P23463 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxd8P23463 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hoxd8P23463 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Hoxd8P23463 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hoxd8P23463 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxd8P23463 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxd8P23463 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxd8P23463 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxd8P23463 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxd8P23463 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Hoxd8P23463 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Gm12933-201ENSMUST00000120203 872 ntBASIC20.66■□□□□ 0.9
Hoxd8P23463 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.66■□□□□ 0.9
Hoxd8P23463 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxd8P23463 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.65■□□□□ 0.9
Hoxd8P23463 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxd8P23463 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Hoxd8P23463 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxd8P23463 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxd8P23463 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.65■□□□□ 0.9
Hoxd8P23463 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hoxd8P23463 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxd8P23463 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.65■□□□□ 0.9
Hoxd8P23463 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.64■□□□□ 0.89
Hoxd8P23463 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxd8P23463 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Hoxd8P23463 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Hoxd8P23463 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxd8P23463 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxd8P23463 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxd8P23463 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.63■□□□□ 0.89
Hoxd8P23463 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.63■□□□□ 0.89
Hoxd8P23463 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.63■□□□□ 0.89
Hoxd8P23463 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxd8P23463 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.62■□□□□ 0.89
Hoxd8P23463 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Hoxd8P23463 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxd8P23463 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxd8P23463 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxd8P23463 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hoxd8P23463 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxd8P23463 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxd8P23463 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxd8P23463 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Hoxd8P23463 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms