Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm12933-201ENSMUST00000120203 872 ntBASIC17.64■□□□□ 0.41
NgfP01139 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.64■□□□□ 0.41
NgfP01139 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.64■□□□□ 0.41
NgfP01139 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.64■□□□□ 0.41
NgfP01139 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NgfP01139 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NgfP01139 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
NgfP01139 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NgfP01139 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NgfP01139 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NgfP01139 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NgfP01139 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.62■□□□□ 0.41
NgfP01139 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.62■□□□□ 0.41
NgfP01139 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NgfP01139 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NgfP01139 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
NgfP01139 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
NgfP01139 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NgfP01139 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.61■□□□□ 0.41
NgfP01139 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NgfP01139 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NgfP01139 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NgfP01139 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NgfP01139 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NgfP01139 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.6■□□□□ 0.41
NgfP01139 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.6■□□□□ 0.41
NgfP01139 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NgfP01139 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NgfP01139 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NgfP01139 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.59■□□□□ 0.41
NgfP01139 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NgfP01139 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NgfP01139 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.59■□□□□ 0.41
NgfP01139 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NgfP01139 Gm10602-201ENSMUST00000098239 609 ntBASIC17.59■□□□□ 0.41
NgfP01139 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NgfP01139 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NgfP01139 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NgfP01139 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NgfP01139 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NgfP01139 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NgfP01139 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NgfP01139 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NgfP01139 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NgfP01139 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.57■□□□□ 0.4
NgfP01139 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NgfP01139 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NgfP01139 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.57■□□□□ 0.4
NgfP01139 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NgfP01139 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NgfP01139 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NgfP01139 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.56■□□□□ 0.4
NgfP01139 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.56■□□□□ 0.4
NgfP01139 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.56■□□□□ 0.4
NgfP01139 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NgfP01139 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NgfP01139 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NgfP01139 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NgfP01139 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms